Category: Journal Papers

Abstract: Detection and monitoring invasive species can provide valuable ecological information to guide management decisions. Multispectral imagery remote sensing may be an ideal tool to address this problem by providing accurate and affordable repeat imagery. However, developing training datasets for remote sensing imagery can be riddled with issues such as matching a training site to […]

Abstract: Turgor loss point (TLP) is an important proxy for plant drought tolerance, species habitat suitability, and drought-induced plant mortality risk. Thus, TLP serves as a critical tool for evaluating climate change impacts on plants, making it imperative to develop high-throughput and in situ methods to measure TLP. We developed hyperspectral pressure–volume curves (PV curves) […]

Abstract: Weakly supervised target detection and semantic segmentation (WSSS) approaches aim at learning object or pixel level classification labels from imprecise, uncertain, or ambiguous data annotations. A crucial step in WSSS is to produce pseudolabels which can be used to train a fully supervised semantic classifier. Post-hoc attention mechanisms, such as class activation mapping (CAM), […]

Abstract: Collecting and analyzing hyperspectral imagery (HSI) of plant roots over time can enhance our understanding of their function, responses to environmental factors, turnover, and relationship with the rhizosphere. Current belowground red-green-blue (RGB) root imaging studies infer such functions from physical properties like root length, volume, and surface area. HSI provides a more complete spectral […]

Abstract: The ecology of forest ecosystems depends on the composition of trees. Capturing fine-grained information on individual trees at broad scales allows an unprecedented view of forest ecosystems, forest restoration and responses to disturbance. To create detailed maps of tree species, airborne remote sensing can cover areas containing millions of trees at high spatial resolution. […]

Abstract: Many vegetables and fruit are sensitive to storage at lower temperatures and experience chilling injury that can result in internal disorder, leading to postharvest waste and economic loss. Most tropical and subtropical fruit, such as avocado and mango, are sensitive to cold storage and can develop chilling injury with symptoms such as abnormal ripening, […]

Abstract: Measuring forest biodiversity using terrestrial surveys is expensive and can only capture common species abundance in large heterogeneous landscapes. In contrast, combining airborne imagery with computer vision can generate individual tree data at the scales of hundreds of thousands of trees. To train computer vision models, ground-based species labels are combined with airborne reflectance […]

Abstract: Root system architectures are complex and challenging to characterize effectively for agronomic and ecological discovery. We propose a new method, Spatial and Texture Analysis of Root System distribution with Earth mover’s Distance (STARSEED), for comparing root system distributions that incorporates spatial information through a novel application of the Earth Mover’s Distance (EMD). We illustrate […]

Abstract: Automated individual tree crown (ITC) delineation plays an important role in forest remote sensing. Accurate ITC delineation benefits biomass estimation, allometry estimation, and species classification among other forest-related tasks, all of which are used to monitor forest health and make important decisions in forest management. In this article, we introduce neuro-symbolic DeepForest, a convolutional […]

Abstract: Heterogeneous data fusion can enhance the robustness and accuracy of an algorithm on a given task. However, due to the difference in various modalities, aligning the sensors and embedding their information into discriminative and compact representations is challenging. In this paper, we propose a Contrastive learning based MultiModal Alignment Network (CoMMANet) to align data […]