{"id":11,"date":"2015-11-03T15:53:38","date_gmt":"2015-11-03T20:53:38","guid":{"rendered":"https:\/\/test.eng.ufl.edu\/faculty-site\/?page_id=11"},"modified":"2026-04-06T17:12:41","modified_gmt":"2026-04-06T21:12:41","slug":"publications","status":"publish","type":"page","link":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\n<p><a href=\"##UR\">Under Review<\/a> | <a href=\"##2026\">2026<\/a> | <a href=\"##2025\">2025<\/a> | <a href=\"##2024\">2024<\/a> | <a href=\"##2023\">2023<\/a> | <a href=\"##2022\">2022<\/a> | <a href=\"##2021\">2021<\/a> | <a href=\"##2020\">2020<\/a> | <a href=\"##2019\">2019<\/a> | <a href=\"##2018\">2018<\/a> | <a href=\"##2017\">2017<\/a> | <a href=\"##2016\">2016<\/a> | <a href=\"##2015\">2015<\/a> | <a href=\"##2014\">2014<\/a> | <a href=\"##2013\">2013<\/a> | <a href=\"##2012\">2012<\/a> | <a href=\"##2011\">2011<\/a> | <a href=\"##2010\">2010<\/a> | <a href=\"##2009\">2009<\/a> | <a href=\"##2008\">2008<\/a> | <a href=\"##2007\">2007<\/a> | <a href=\"##2006\">2006<\/a> | <a href=\"##2004\">2004<\/a> | <a href=\"##PP\">Preprint<\/a><\/p>\n\n\n\n<p><a name=\"#UR\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Under Review \/ In Preparation<\/h2>\n\n\n\n<p>A. Hampton, D. Stewart, A. Zare, and J. Keller, &#8220;Comparison of unsupervised quantitative metrics for superpixel segmentation,&#8221; Computer Vision and Image Understanding, Elsevier, 2025. Under Review<\/p>\n\n\n\n<p><a name=\"#2026\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2026<\/h2>\n\n\n\n<p>A. Hampton, K. Chhapariya, Y. Itoh, A. Zare, and M. Parente, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/06\/introducing-a-ground-truthed-multi-resolution-drone-based-hyperspectral-dataset-for-unmixing-tasks\/\">\u201cIntroducing a Ground-Truthed Multi-Resolution Drone-Based Hyperspectral Dataset for Unmixing Tasks,\u201d<\/a> in <em>Proc. IEEE Int. Geosci. Remote Sens. Symp. (IGARSS)<\/em>. 2026. ACCEPTED!<\/p>\n\n\n\n<p>M. Zhou and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/06\/task-guided-multi-annotation-triplet-learning-for-remote-sensing-representations\/\">\u201cTask-Guided Multi-Annotation Triplet Learning for Remote Sensing Representations,\u201d<\/a> in <em>Proc. IEEE Int. Geosci. Remote Sens. Symp. (IGARSS)<\/em>. 2026. ACCEPTED!<\/p>\n\n\n\n<p>M. Zhou and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/06\/beyond-task-driven-features-for-object-detection\/\">\u201cBeyond Task-Driven Features for Object Detection,\u201d<\/a> in <em>Proc. IEEE Int. Geosci. Remote Sens. Symp. (IGARSS)<\/em>. 2026. ACCEPTED!<\/p>\n\n\n\n<p>R. Dutt, G. Zheng, Z. C. Curran, R. Fick, N. Nezlin, M. Medina, W. He, P. M. DiGiacomo, A. Zare, and Z. Jiang, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/a-machine-learning-approach-for-chlorophyll-a-estimation-in-coastal-waters-from-top-of-atmosphere-viirs-satellite-data\/\">\u201cA machine learning approach for chlorophyll-a estimation in coastal waters from top-of-atmosphere VIIRS satellite data,\u201d<\/a> <em>IEEE Transactions on Geoscience and Remote Sensing<\/em>, 2026.<\/p>\n\n\n\n<p>H. Schuhl, K. E. Brown, H. Sheng, P. K. Bhatt, J. Gutierrez, D. Schneider, A. L. Casto, L. Acosta-Gamboa, J. G. Ballenger, F. Barbero, J. Braley, A. M. Brown, L. Chavez, S. Cunningham, M. Dilhara, A. M. Dimech, J. G. Duenwald, A. Fischer, J. M. Gordon, C. Hendrikse, G. L. Hernandez, J. G. Hodge, M. Huber, B. M. Hurr, S. Jarolmasjed, K. M. Jimenez, S. Kenney, G. Konkel, A. Kutschera, S. Lama, M. Lohbihler, A. Lorence, C. Luebbert, N. Ly, H. K. Manching, A. Marrano, S. Meerdink, N. M. Miklave, P. Mudrageda, K. M. Murphy, J. D. Peery, R. Pierik, S. Polydore, C. Robey, T. Rogers, T. J. Schultz, E. Seigel, D. Srivastava, S. Summerer, J. Sumner, C. Teng, A. E. Thompson, J. C. Tovar, T. van Daalen, M. Watson, J. J. Wheeler, M. C. Wilson, K. R. Ying, A. Zare, Y. Zhou, M. A. Gehan, and N. Fahlgren, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/03\/10\/plantcv-v4-image-analysis-software-for-high-throughput-plant-phenotyping\/\">\u201cPlantCV v4: Image analysis software for high-throughput plant phenotyping,\u201d<\/a> <em>The Plant Phenome Journal<\/em>, vol. 9, no. 1, p. e70065, 2026, doi: 10.1002\/ppj2.70065.<\/p>\n\n\n\n<p><a name=\"#2025\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2025<\/h2>\n\n\n\n<p>P. D. Milligan, J. Rossiter, A. Zare, T. M. Palmer, J. Lemboi, G. M. Mizell, J. Mosiany, C. Riginos, J. R. Goheen, and E. G. Pringle, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/mutualism-herbivory-and-invasive-ants-as-seasonally-dependent-drivers-of-root-surface-area-in-a-foundational-savanna-ant-plant\/\">\u201cMutualism, herbivory, and invasive ants as seasonally dependent drivers of root surface area in a foundational savanna ant\u2013plant,\u201d<\/a> <em>New Phytologist<\/em>, vol. 249, no. 2, pp. 777\u2013791, 2026.<\/p>\n\n\n\n<p>J. Peeples, S. A. Kharsa, L. Saleh and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/07\/histogram-layers-for-neural-engineered-features\/\">&#8220;Histogram Layers for Neural \u201cEngineered\u201d Features,&#8221;<\/a> <em>in IEEE Transactions on Artificial Intelligence,<\/em> July 2025, doi: 10.1109\/TAI.2025.3593445.<\/p>\n\n\n\n<p>C. Messina, J. Garcia-Abadillo, O. Powell, S. Tomura, A. Zare, B. Ganapathysubramanian, and M. Cooper, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/07\/14\/toward-a-general-framework-for-ai-enabled-prediction-in-crop-improvement\/\">\u201cToward a general framework for AI-enabled prediction in crop improvement,\u201d<\/a> Theor. Appl. Genet., vol. 138, no. 7, p. 151, 2025.<\/p>\n\n\n\n<p>S. J. Graves, R. Chowdhry, M. Zhou, I. Harmon, B. Weinstein, S. K. M. Ernest, A. Zare, E. P. White, and S. A. Bohlman, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/?p=14167&amp;preview=true\">\u201cFacilitating macrosystem biology with organismal-scale airborne remote sensing: Challenges and opportunities,\u201d<\/a> Funct. Ecol., 2025.<\/p>\n\n\n\n<p>M. Zhou, A. Dutt, and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/04\/multi-task-learning-with-multi-annotation-triplet-loss-for-improved-object-detection\/\">&#8220;Multi-Task Learning with Multi-Annotation Triplet Loss for Improved Object Detection,&#8221;<\/a> <em>in IGARSS 2025 &#8211; 2025 IEEE International Geoscience and Remote Sensing Symposium,<\/em> 2025.<\/p>\n\n\n\n<p>A. Dutt, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/a-multimodal-alignment-network-for-domain-translation-and-fusion\/\">&#8220;A MultiModal Alignment Network for Domain Translation and Fusion,&#8221;<\/a> Ph.D Thesis, Gainesville, FL, 2025.<\/p>\n\n\n\n<p>M. Cook, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/competency-awareness-using-null-space-projections\/\">\u201cCompetency Awareness Using Null Space Projections,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2025.<\/p>\n\n\n\n<p>S. J. Chang, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/enhancing-semantic-segmentation-using-locally-learned-histogram-features\/\">\u201cEnhancing Semantic Segmentation Using Locally Learned Histogram Features,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2025.<\/p>\n\n\n\n<p>X. Guo, A. Zare, L. Anthony, and F. B. Fritschi, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/04\/interactive-segmentation-with-prototype-learning-for-few-shot-root-annotation\/\">&#8220;Interactive segmentation with prototype learning for few-shot root annotation,&#8221;<\/a> <em>IEEE Transactions on Geoscience and Remote Sensing,<\/em> pp. 1\u20131, 2025, doi: 10.1109\/TGRS.2025.3556799.<\/p>\n\n\n\n<p>A. K. Sharma, L. Zotarelli, A. Zare, and L. K. Sharma, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/02\/automated-potato-tuber-mass-estimation-and-grading-with-multiangle-2d-images\/\">&#8220;Automated potato tuber mass estimation and grading with multiangle 2D images,&#8221;<\/a> <em>Smart Agricultural Technology<\/em>, vol. 10, p. 100832, 2025. doi: 10.1016\/j.atech.2025.100832.<\/p>\n\n\n\n<p>M. Lary, R. Samuelson, A. Wilentz, A. Zare, M. Klawonn, and J. P. Fairbanks, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/diagrammaticlearning-a-graphical-language-for-compositional-training-regimes\/\">\u201cDiagrammaticLearning: A graphical language for compositional training regimes,\u201d<\/a> <em>arXiv preprint arXiv:2501.01515<\/em>, 2025.<\/p>\n\n\n\n<p><a name=\"#2024\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2024<\/h2>\n\n\n\n<p>D.-Y. Kim, F. Getachew, B. L. Tillman, B. Zurweller, W. M. Hammond, A. Zare, R. Holton, and Z. Brym, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/developing-statistical-models-of-aflatoxin-risk-in-peanuts-using-historical-weather-data\/\">\u201cDeveloping statistical models of aflatoxin risk in peanuts using historical weather data,\u201d<\/a> <em>Agronomy Journal<\/em>, vol. 116, no. 5, pp. 2346\u20132361, 2024.<\/p>\n\n\n\n<p>J. J. Pitts, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/the-future-of-coffee-and-peanut-cultivation-under-further-climate-change-drought-and-environmental-impacts-on-crop-physiology-resilience-disease-formation-and-stress-detection\/\">\u201cThe Future of Coffee and Peanut Cultivation Under Further Climate Change: Drought and Environmental Impacts on Crop Physiology, Resilience, Disease Formation and Stress Detection,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2024.<\/p>\n\n\n\n<p>B. G. Weinstein, S. Marconi, A. Zare, S. A. Bohlman, A. Singh, S. J. Graves, L. Magee, D. J. Johnson, S. Record, V. E. Rubio, N. G. Swenson, P. Townsend, T. T. Veblen, R. A. Andrus, and E. P. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/11\/individual-tree-crown-maps-for-the-national-ecological-observatory-network\/\">&#8220;Individual canopy tree species maps for the National Ecological Observatory Network,&#8221;<\/a> PLoS Biology, vol. 22, no. 7, p. e3002700, Jul. 2024, doi: 10.1371\/journal.pbio.3002700.<\/p>\n\n\n\n<p>S. J. Chang, R. Chowdhry, Y. Song, T. Mejia, A. Hampton, S. Kucharski, T. M. Sazzad, Y. Zhang, S. J. Koppal, C. H. Wilson, and others, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/11\/hyperpri-a-dataset-of-hyperspectral-images-for-underground-plant-root-study\/\">&#8220;HyperPRI: A dataset of hyperspectral images for underground plant root study,&#8221;<\/a> <em>Computers and Electronics in Agriculture<\/em>, vol. 225, p. 109307, 2024.<\/p>\n\n\n\n<p>A. K. Sahoo, H. Geldimuradov, A. Zygala, Y. Cui, M. Lotfollahi, K. Gong, K. Smith, A. Zare, and S. M. Weisberg, Deep learning approaches to associate neural structure with spatial navigation function. Poster presentation at the 65th Annual Meeting of the Psychonomic Society. New York, NY. 2024.<\/p>\n\n\n\n<p>R. Gupta, S. K. Pothapragada, W. Xu, P. K. Goel, M. A. Barrera, M. S. Saldanha, J. B. Harley, K. T. Morgan, A. Zare, and L. Zotarelli, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/10\/estimating-soil-mineral-nitrogen-from-data-sparse-field-experiments-using-crop-model-guided-deep-learning-approach\/\">&#8220;Estimating soil mineral nitrogen from data-sparse field experiments using crop model-guided deep learning approach,&#8221;<\/a> Computers and Electronics in Agriculture, vol. 225, p. 109355, 2024.<\/p>\n\n\n\n<p>Z. Tian, J. Upchurch, G. A. Simon, J. Dubeux, A. Zare, C. Zhao, and J. B. Harley, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/10\/quantifying-heterogeneous-ecosystem-services-with-multi-label-soft-classification\/\">&#8220;Quantifying Heterogeneous Ecosystem Services with Multi-Label Soft Classification,&#8221;<\/a> in IGARSS 2024 &#8211; 2024 IEEE International Geoscience and Remote Sensing Symposium, pp. 427\u2013431, 2024.<\/p>\n\n\n\n<p>Y. Song, G. Sapes, S. Chang, R. Chowdhry, T. Mejia, A. Hampton, S. Kucharski, T. Sazzad, Y. Zhang, S Koppal, and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/08\/hyperspectral-signals-in-the-soil-plant-soil-hydraulic-connection-and-disequilibrium-as-mechanisms-of-drought-tolerance-and-rapid-recovery\/\">&#8220;Hyperspectral signals in the soil: plant-soil hydraulic connections as mechanisms of drought tolerance and rapid recovery,&#8221;<\/a> in Plant, Cell &amp; Environment, 2024.<\/p>\n\n\n\n<p>B. G. Weinstein, S. Marconi, A. Zare, S. A. Bohlman, A. Singh, S. J. Graves, L. Magee, D. J. Johnson, S. Record, V. E. Rubio, and others, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/10\/individual-canopy-tree-species-maps-for-the-national-ecological-observatory-network\/\">&#8220;Individual canopy tree species maps for the National Ecological Observatory Network,&#8221;<\/a> PLOS Biology, vol. 22, no. 7, p. e3002700, 2024.<\/p>\n\n\n\n<p>S. Meerdink, D. Hiatt, S. Flory, A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/06\/dealing-with-imperfect-data-for-invasive-species-detection-using-multispectral-imagery\/\">&#8220;Dealing with imperfect data for invasive species detection using multispectral imagery,&#8221;<\/a> in <em>Ecological informatics<\/em>, vol. 79, p. 102432, 2024, doi: doi.org\/10.1016\/j.ecoinf.2023.102432.<\/p>\n\n\n\n<p>R. Castillo-Argaez, G. Sapes, N. Mallen, A. Lippert, G. John, A. Zare and W. Hammond, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/06\/spectral-ecophysiology-hyperspectral-pressure-volume-curves-to-estimate-leaf-turgor-loss\/\">&#8220;Spectral ecophysiology: hyperspectral pressure&#8211;volume curves to estimate leaf turgor loss,&#8221;<\/a> in <em>New Phytologist<\/em>, vol. 242, no. 3, pp. 935-946, 2024, doi: 10.1111\/nph.19669.<\/p>\n\n\n\n<p>X. Guo, Q. Li, S. Morrison-Smith, L. Anthony, A. Zare, Y. Song, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/06\/elicitating-challenges-and-user-needs-associated-with-annotation-software-for-plant-phenotyping\/\">&#8220;Elicitating Challenges and User Needs Associated with Annotation Software for Plant Phenotyping,&#8221;<\/a> in <em>Proceedings of the 29th International Conference on Intelligent User Interfaces<\/em>, pp. 431-443, 2024, doi: doi.org\/10.1145\/3640543.3645178.<\/p>\n\n\n\n<p><a name=\"#2023\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2023<\/h2>\n\n\n\n<p>X. Guo, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/interactive-segmentation-with-deep-metric-learning\/\">\u201cInteractive Segmentation With Deep Metric Learning,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2023.<\/p>\n\n\n\n<p>Y. Cui, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/weakly-supervised-point-cloud-semantic-segmentation-with-graph-convolutional-networks\/\">\u201cWeakly Supervised Point Cloud Semantic Segmentation With Graph Convolutional Networks,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2023.<\/p>\n\n\n\n<p>W. Xu, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/deep-morph-convolutional-neural-network-combining-morphological-transform-and-convolution-in-deep-neural-networks\/\">\u201cDeep Morph-Convolutional Neural Network: Combining Morphological Transform and Convolution in Deep Neural Networks,\u201d<\/a> Ph.D Thesis, Gainesville, FL, 2023.<\/p>\n\n\n\n<p>H. D. Smith, J. C. B. Dubeux, A. Zare, and C. H. Wilson, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2025\/10\/assessing-transferability-of-remote-sensing-pasture-estimates-using-multiple-machine-learning-algorithms-and-evaluation-structures\/\">\u201cAssessing transferability of remote sensing pasture estimates using multiple machine learning algorithms and evaluation structures,\u201d<\/a> Remote Sensing, vol. 15, no. 11, p. 2940, 2023.<\/p>\n\n\n\n<p>M. Cook, A. Khoury, A. Zare and P. Gader, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/05\/null-space-analysis-for-detecting-unknown-objects-during-automatic-target-recognition-tasks-in-sonar-data\/\">&#8220;Null Space Analysis for Detecting Unknown Objects During Automatic Target Recognition Tasks in Sonar Data,&#8221;<\/a> OCEANS 2023 &#8211; MTS\/IEEE U.S. Gulf Coast, Biloxi, MS, USA, 2023, pp. 1-5, doi: 10.23919\/OCEANS52994.2023.10337218.<\/p>\n\n\n\n<p>C. H. McCurley and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2024\/01\/segmentation-pseudo-label-generation-using-the-multiple-instance-learning-choquet-integral\/\">&#8220;Segmentation Pseudo-label Generation using the Multiple Instance Learning Choquet Integral,&#8221;<\/a> in IEEE Transactions on Fuzzy Systems, doi: 10.1109\/TFUZZ.2023.3338049.<\/p>\n\n\n\n<p>S. Graves, S. Marconi, D. Stewart, I. Harmon, B. G. Weinstein, Y. Kanazawa, V. M Scholl, M. B. Joseph, J. McClinchy, L. Browne, M. K. Sullivan, S. Estrada-Villegas, D. Zhe Wang, A. Singh, S. A. Bohlman, A. Zare, E. P. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/08\/data-science-competition-for-cross-site-delineation-and-classification-of-individual-trees-from-airborne-remote-sensing-data\/\">&#8220;Data science competition for cross-site delineation and classification of individual trees from airborne remote sensing data.&#8221;<\/a> PeerJ, 2023, doi: 10.7717\/peerj.16578.<\/p>\n\n\n\n<p>X. Guo, C. Tseung, A. Zare, T. Liu. <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/08\/hyperspectral-image-analysis-for-the-evaluation-of-chilling-injury-in-avocado-fruit-during-cold-storage\/\">&#8220;Hyperspectral image analysis for the evaluation of chilling injury in avocado fruit during cold storage,&#8221;<\/a> Postharvest Biology and Technology, vol. 206, p.112558, ISSN 0925-5214, 2023.<\/p>\n\n\n\n<p>B. G. Weinstein, S. Marconi, S. J. Graves, A. Zare, A. Singh, S. A. Bohlman, L. Magee, D. J. Johnson, P. A. Townsend, E. P. White. <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/04\/capturing-long-tailed-individual-tree-diversity-using-an-airborne-multi-temporal-hierarchical-model\/\">&#8220;Capturing long-tailed individual tree diversity using an airborne multi-temporal hierarchical model.&#8221;<\/a> Remote Sensing in Ecology and Conservation, vol. 9, pp. 656-670, 2023, doi: 10.1002\/rse2.335.<\/p>\n\n\n\n<p>D. Stewart, A. Kreulach, S. F. Johnson and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/12\/image-to-height-domain-translation-for-synthetic-aperture-sonar\/\">&#8220;Image-to-Height Domain Translation for Synthetic Aperture Sonar,&#8221;<\/a> in&nbsp;<em>IEEE Transactions on Geoscience and Remote Sensing<\/em>, vol. 61, pp. 1-13, 2023, Art no. 4201113, doi: 10.1109\/TGRS.2023.3236473.<\/p>\n\n\n\n<p>J. Peeples, W. Xu, R. Gloaguen, D. Rowland, A. Zare, and Z. Brym, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/02\/spatial-and-texture-analysis-of-root-system-distribution-with-earth-movers-distance-starseed\/\">&#8220;Spatial and Texture Analysis of Root System distribution with Earth mover\u2019s Distance (STARSEED),&#8221;<\/a> in Plant Methods, vol. 19, pp. 1-15, ISSN 1746-4811. 2023, Art no. 2, doi: 10.1186\/s13007-022-00974-z.<\/p>\n\n\n\n<p><a name=\"#2022\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2022<\/h2>\n\n\n\n<p>X. Guo, Y. Ahlawat, A. Zare and T. Liu, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/12\/evaluation-of-postharvest-senescence-in-broccoli-via-hyperspectral-imaging\/\">&#8220;Evaluation of Postharvest Senescence in Broccoli via Hyperspectral Imaging.&#8221;<\/a> Plant Phenomics. 2022. doi: 10.34133\/2022\/9761095.<\/p>\n\n\n\n<p>A. Starke, K. Nagaraj, C. Ruben, N. Aljohani, S. Zou, A. Bretas, J. McNair and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/08\/cross-layered-distributed-data-driven-framework-for-enhanced-smart-grid-cyber-physical-security\/\">&#8220;Cross-Layered Distributed Data-Driven Framework for Enhanced Smart Grid Cyber-Physical Security.&#8221;<\/a>&nbsp;in IET Smart Grid. vol. 5.&nbsp;issue 6. pages 398-416. ISSN 2515-2947. 2022.<\/p>\n\n\n\n<p>I. Harmon, S. Marconi, B. Weinstein, S. Graves, D.Z. Wang, S. Bohlman, A. Zare, A. Singh, and E. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/11\/injecting-domain-knowledge-into-deep-neural-networks-for-tree-crown-delineation\/\">&#8220;Injecting Domain Knowledge Into Deep Neural Networks for Tree Crown Delineation,&#8221;<\/a> in IEEE Transactions on Geoscience and Remote Sensing, vol. 60, pp. 1-19, 2022, Art no. 4415419, doi: 10.1109\/TGRS.2022.3216622.<\/p>\n\n\n\n<p>A. Dutt, A. Zare and P. Gader, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/11\/shared-manifold-learning-using-a-triplet-network-for-multiple-sensor-translation-and-fusion-with-missing-data\/\">&#8220;Shared Manifold Learning Using a Triplet Network for Multiple Sensor Translation and Fusion With Missing Data,&#8221;<\/a> in IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, vol. 15, pp. 9439-9456, 2022, doi: 10.1109\/JSTARS.2022.3217485.<\/p>\n\n\n\n<p>C. McCurley, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/02\/discriminative-feature-learning-with-imprecise-uncertain-and-ambiguous-data\/\">&#8220;Discriminative Feature Learning with Imprecise, Uncertain, and Ambiguous Data,&#8221;<\/a> Ph.D Thesis, Gainesville, FL, 2022.<\/p>\n\n\n\n<p>J. Peeples, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/11\/connecting-the-past-and-the-present-histogram-layers-for-texture-analysis-2\/\">&#8220;Connecting the Past and the Present : Histogram Layers for Texture Analysis,&#8221;<\/a> Ph.D Thesis, Gainesville, FL, 2022.<\/p>\n\n\n\n<p>D. Stewart, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/11\/domain-translation-and-image-registration-for-multi-look-synthetic-aperture-sonar-scene-understanding\/\">&#8220;Domain Translation and Image Registration for Multi-Look Synthetic Aperture Sonar Scene Understanding,&#8221;<\/a> Ph.D Thesis, Gainesville, FL, 2022.<\/p>\n\n\n\n<p>R. Fick, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2023\/08\/robust-gans-for-semi-supervised-classification\/\">&#8220;Robust GANs for Semi-Supervised Classification,&#8221;<\/a> Ph.D Thesis, Gainesville, FL, 2022.<\/p>\n\n\n\n<p>S. Marconi, B.G. Weinstein, S. Zou, S.A. Bohlman, A. Zare, A. Singh, D. Stewart, I. Harmon, A. Steinkraus, and E.P. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/10\/continental-scale-hyperspectral-tree-species-classification-in-the-united-states-national-ecological-observatory-network\/\">&#8220;Continental-scale hyperspectral tree species classification in the United States National Ecological Observatory Network.&#8221;<\/a> Remote Sensing of Environment, vol.&nbsp;282, p.113264.,&nbsp;ISSN 0034-4257, 2022.<\/p>\n\n\n\n<p>C. McCurley, D. Rodriguez, C. Trousdale, A. Stevens, A. Baldino, E. Li, I. Perlmutter, and A. Zare <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/06\/bag-level-classification-network-for-infrared-target-detection\/\">&#8220;Bag-level classification network for infrared target detection&#8221;<\/a>, in Proc. SPIE 12096, Automatic Target Recognition XXXII, 1209603, doi: 10.1117\/12.2618325, 2022.<\/p>\n\n\n\n<p>Maggie M. Hantak, Robert P. Guralnick, A. Zare, Brian J. Stucky, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/02\/computer-vision-for-assessing-species-color-pattern-variation-from-web-based-community-science-images\/\">&#8220;Computer vision for assessing species color pattern variation from web-based community science images&#8221;<\/a>, pp. 104784, ISSN 2589-0042, https:\/\/doi.org\/10.1016\/j.isci.2022.104784, in iScience, 2022.<\/p>\n\n\n\n<p>J. Peeples, J. Jameson, N. Kotta, J. Grasman, W. Stoppel, and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/11\/jointly-optimized-spatial-histogram-unet-architecture-joshua-for-adipose-tissue-segmentation\/\">\u201cJointly Optimized Spatial Histogram UNET Architecture (JOSHUA) for Adipose Tissue Segmentation\u201d<\/a> in BME Frontiers, vol. 2022, doi: 10.34133\/2022\/9854084.<\/p>\n\n\n\n<p>S.K. Meerdink, J. Bocinsky, A. Zare, N. Kroeger, C. H. McCurley, D. Shats and P.D. Gader, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/03\/multi-target-multiple-instance-learning-for-hyperspectral-target-detection\/\">&#8220;Multi-Target Multiple Instance Learning for Hyperspectral Target Detection,&#8221;<\/a> in <em>IEEE Transaction on Geoscience and Remote Sensing (TGRS),<\/em> vol. 60, pp. 1-14, Art no. 5502814, doi: 10.1109\/TGRS.2021.3060966, 2022.<\/p>\n\n\n\n<p>J. Peeples, S. Walker, C. McCurley, A. Zare, J. Keller and and W. Xu, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/03\/divergence-regulated-encoder-network-for-joint-dimensionality-reduction-and-classification\/\">&#8220;Divergence Regulated Encoder Network for Joint Dimensionality Reduction and Classification.&#8221;<\/a>, in IEEE Geoscience and Remote Sensing Letters, vol. 19, pp. 1-5, 2022, Art no. 3511305, doi: 10.1109\/LGRS.2022.3156532.<\/p>\n\n\n\n<p>W. Xu, G. Yu, Y. Cui, R. Gloaguen, A. Zare, J. Bonnette, J. Reyes-Cabrera, A. Rajurkar, D. Rowland, R. Matamala, J. Jastrow, T. Juenger, and F. Fritschi. <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/01\/prmi-a-dataset-of-minirhizotron-images-for-diverse-plant-root-study\/\">\u201cPRMI: A Dataset of Minirhizotron Images for Diverse Plant Root Study.\u201d<\/a> in AI for Agriculture and Food Systems (AIAFS)Workshops at the AAAI conference on artificial intelligence. February, 2022.<\/p>\n\n\n\n<p>J. Peeples, C. McCurley, S. Walker, D. Stewart and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/10\/learnable-adaptive-cosine-estimator-lace-for-image-classification\/\">&#8220;Learnable Adaptive Cosine Estimator (LACE) for Image Classification.<\/a>&#8221; in WACV, 2022.<\/p>\n\n\n\n<p><a name=\"#2021\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2021<\/h2>\n\n\n\n<p>G. Yu, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/11\/weakly-supervised-image-segmentation-with-multiple-instance-learning-neural-network\/\">&#8220;Weakly Supervised Image Segmentation with Multiple Instance Learning Neural Network,&#8221;<\/a> Ph.D. Thesis, Gainesville, FL, 2021.<\/p>\n\n\n\n<p>J. Peeples, W. Xu and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/07\/histogram-layers-for-texture-analysis\/\">&#8220;Histogram Layers for Texture Analysis.&#8221;<\/a> in IEEE Transactions on Artificial Intelligence, DOI 10.1109\/TAI.2021.3135804, 2021.<\/p>\n\n\n\n<p>D. Stewart, A. Zare, S. Marconi, B. Weinstein, E. White, S. Graves, S. Bohlman and A. Singh,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/05\/addressing-annotation-imprecision-for-tree-crown-delineation-using-the-randcrowns-index\/\"> &#8220;RandCrowns: A Quantitative Metric for Imprecisely Labeled Tree Crown Delineation.&#8221;<\/a>, vol. 14, pp. 11229-11239, DOI 10.1109\/JSTARS.2021.3122345, 2021.<\/p>\n\n\n\n<p>T. Zou, N. Aljohani, K. Nagaraj, S. Zou, C. Ruben, A. Bretas, A. Zare and J. McNair, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/08\/parameter-fdi-correction-physics-based-model-a-machine-learning-synthetic-measurement-based-approach\/\">&#8220;A Network Parameter Database FDI Correction Physics-based Model: A Machine Learning Synthetic Measurement based Approach.&#8221;<\/a> in Applied Sciences Journal, vol. 11, 2021.<\/p>\n\n\n\n<p>V. R. Merenda, J. Ruiz-Munoz, A. Zare and R. C. Chebel, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/07\/predictive-models-to-identify-holstein-cows-at-risk-of-metritis-and-clinical-cure-and-reproductive-productive-failure-following-antimicrobial-treatment\/\">&#8220;Predictive models to identify Holstein cows at risk of metritis and clinical cure and reproductive\/productive failure following antimicrobial treatment,&#8221;<\/a> in <em>Preventive Veterinary Medicine<\/em>, vol. 194, pp. 105431, 2021.<\/p>\n\n\n\n<p>B. Weinstein, S. Graves, S. Marconi, A. Singh, A. Zare, D. Stewart, S. Bohlman and E. P. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/11\/a-benchmark-dataset-for-individual-tree-crown-delineation-in-co-registered-airborne-rgb-lidar-and-hyperspectral-imagery-from-the-national-ecological-observation-network\/\">&#8220;A benchmark dataset for individual tree crown delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network,&#8221;<\/a> in <em>PLOS Computational Biology, vol. 2, pp. 1-18, DOI 10.1371\/journal.pcbi.1009180, 2021.<\/em><\/p>\n\n\n\n<p>S. Zou,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/05\/classification-with-multi-imprecise-labels\/\"> &#8220;Classification with Multi-Imprecise Labels,&#8221;<\/a> Ph.D. Thesis, Gainesville, FL, 2021.<\/p>\n\n\n\n<p>C. Jiao, C. Chen, S. Gou, D. Hai, B. Su, M. Skubic, L. Jiao, A. Zare and K.C. Ho, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/04\/non-invasive-heart-rate-estimation-from-ballistocardiograms-using-bidirectional-lstm-regression\/\">&#8220;Non-Invasive Heart Rate Estimation from Ballistocardiograms using Bidirectional LSTM Regression,&#8221;<\/a> in <em>IEEE Journal of Biomedical and Health Informatics,<\/em>&nbsp;2021.<\/p>\n\n\n\n<p>R. A. Borsoi, T. Imbiriba, J.C.M. Bermudez, C. Richard, J. Chanussot, L. Drumetz, J. Tourneret, A. Zare and C. Jutten, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/01\/spectral-variability-in-hyperspectral-data-unmixing-a-comprehensive-review\/\">&#8220;Spectral Variability in Hyperspectral Data Unmixing: A Comprehensive Review,&#8221;<\/a> in <em>IEEE Geoscience and Remote Sensing Magazine, vol. 9, no. 4, pp. 223-270, Dec. 2021, doi: 10.1109\/MGRS.2021.3071158.<\/em><\/p>\n\n\n\n<p>D. Prioleau, K. Alikhademi, A. Roberts, J. Peeples, A. Zare and J. Gilbert, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/03\/application-of-divisive-clustering-for-reducing-bias-in-imbalanced-data\/\">&#8220;Application of Divisive Clustering for Reducing Bias in Imbalanced Data,&#8221;<\/a> in <em>2021 International Conference on Machine Learning and Data Mining (MLDM), P-ISSN 1864-9734, E-ISSN 2699-5220, ISBN 978-3-942952-81-1, pp. 115-129, 2021<\/em>.<\/p>\n\n\n\n<p>D. Stewart, A. Hampton, A. Zare, J. Dale and J. Keller, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/03\/the-weakly-labeled-rand-index\/\">&#8220;The Weakly-Labeled Rand Index,&#8221;<\/a> in <em>IEEE International Geoscience and Remote Sensing Symposium (IGARSS), pp. 2313-2316, doi: 10.1109\/IGARSS47720.2021.9553182, 2021.<\/em><\/p>\n\n\n\n<p>S. Walker, J. Peeples, J. Dale, J. Keller and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/03\/explainable-systematic-analysis-for-synthetic-aperture-sonar-imagery\/\">&#8220;Explainable Systematic Analysis for Synthetic Aperture Sonar Imagery,&#8221;<\/a> in <em>IEEE International Geoscience and Remote Sensing Symposium (IGARSS)<\/em>, pp. 2835-2838, doi: 10.1109\/IGARSS47720.2021.9554901, 2021.<\/p>\n\n\n\n<p>K. Nagaraj, N. Aljohani, S. Zou, T. Zou, A. Bretas, J. McNair and A. Zare, \u201cSmart FDI Attack Design and Detection with Data Transmutation Framework for Smart Grids,\u201d in 2021 <em>IEEE PES General Meeting<\/em>, July 25-29, 2021, Washington, DC, USA.<\/p>\n\n\n\n<p>B. G. Weinstein, S. Marconi, S. A. Bohlman, A. Zare, A. Singh, S. J. Graves and E. P. White. <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/02\/a-remote-sensing-derived-data-set-of-100-million-individual-tree-crowns-for-the-national-ecological-observatory-network\/\">&#8220;A remote sensing derived data set of 100 million individual tree crowns for the National Ecological Observatory Network,&#8221;<\/a> in <em>eLife,<\/em>&nbsp;2021.<\/p>\n\n\n\n<p>K. Nagaraj, N. Aljohani, S. Zou, C. Ruben,&nbsp; A. Bretas, A. Zare and J. McNair, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/08\/state-estimator-and-machine-learning-analysis-of-residual-differences-to-detect-and-identify-fdi-and-parameter-errors-in-smart-grids\/\">&#8220;State Estimator and Machine Learning Analysis of Residual Differences to Detect and Identify FDI and Parameter Errors in Smart Grids,&#8221;<\/a> in <em>2020 North American Power Symposium (NAPS), 2021<\/em>.<\/p>\n\n\n\n<p><a name=\"#2020\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2020<\/h2>\n\n\n\n<p>C. Jiao, X. Du, A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2022\/06\/addressing-the-inevitable-imprecision-multiple-instance-learning-for-hyperspectral-image-analysis\/\">&#8220;Addressing the Inevitable Imprecision: Multiple Instance Learning for Hyperspectral Image Analysis.&#8221;<\/a> in: Prasad, S., Chanussot, J. (eds) Hyperspectral Image Analysis. Advances in Computer Vision and Pattern Recognition. Springer, Cham, 2020.<\/p>\n\n\n\n<p>G. Yu, A. Zare, W. Xu, R. Matamala, J. Reyes-Cabrera, F. B. Fritschi and T. E. Juenger, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/08\/weakly-supervised-minirhizotron-image-segmentation-with-mil-cam\/\">&#8220;Weakly Supervised Minirhizotron Image Segmentation with MIL-CAM,&#8221;<\/a> in the <em>16th European Conference on Computer Vision (ECCV) Workshop on Computer Vision Problems in Plant Phenotyping (CVPPP 2020),<\/em>&nbsp;2020.<\/p>\n\n\n\n<p>A. Seethepalli, H. Guo, X. Liu, M. Griffiths, H. Almtarfi, Z. Li, S. Liu, A. Zare, F. Fritschi, E. Blancaflor, X. Ma, and L. York, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/03\/rhizovision-crown-an-integrated-hardware-and-software-platform-for-root-crown-phenotyping\/\">RhizoVision Crown: An Integrated Hardware and Software Platform for Root Crown Phenotyping<\/a>,\u201d in <em>Plant Phenomics<\/em>,vol. 2020, Article ID 3074916, 15 pages, 2020.<\/p>\n\n\n\n<p>K. Nagaraj, S. Zou, C. Ruben, S. C. Dhulipala, A. Starke, A. Bretas, A. Zare and J. McNair, &#8220;<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/06\/ensemble-corrdet-with-adaptive-statistics-for-bad-data-detection\/\">Ensemble CorrDet with Adaptive Statistics for Bad Data Detection<\/a>,&#8221; in <em>IET Smart Grid.<\/em>&nbsp; pp. 572 \u2013 580, vol. 3, 2020.<\/p>\n\n\n\n<p>C. A. Smith, Y. Cui, B. D. Miler, D. D. Keiser, A. Zare and A. Aitkaliyeva, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/09\/new-approach-for-measuring-interconnectivity-of-fission-gas-pores-in-nuclear-fuels-from-2d-micrographs\/\">&#8220;New approach for measuring interconnectivity of fission gas pores in nuclear fuels from 2D micrographs,&#8221;<\/a> in <em>Journal of Materials Science,<\/em>&nbsp;2020.<\/p>\n\n\n\n<p>M. Cook, A. Zare and P. Gader, &#8220;<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/07\/outlier-detection-through-null-space-analysis-of-neural-networks\/\">Outlier Detection through Null Space Analysis of Neural Networks,<\/a>&#8221; presented at the <em>37th International Conference on Machine Learning<\/em> (<em>ICML 2020) Workshop on Uncertainty and Robustness in Deep Learning (UDL),<\/em>&nbsp;Virtual Conference, 2020.<\/p>\n\n\n\n<p>J.F. Ruiz-Munoz, J.K. Nimmagadda, T.G. Dowd, J.E. Baciak and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/03\/super-resolution-for-root-imaging\/\">&#8220;Super Resolution for Root Imaging,&#8221;<\/a> in <em>Applications in Plant Sciences (APPS), vol. 8, num. 7, pp. e11374, 2020<\/em>.<\/p>\n\n\n\n<p><span class=\"author\">P. S. Soltis, <\/span><span class=\"author\">&nbsp;G. Nelson,<\/span> A. <span class=\"author\">Zare<\/span>, and E. K. <span class=\"author\">Meineke, &#8220;<\/span><span class=\"articleTitle\"><a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/07\/plants-meet-machines-prospects-in-machine-learning-for-plant-biology\/\">Plants meet machines: Prospects in machine learning for plant biology<\/a>,<\/span>&#8221; in <em>Applications in Plant Sciences,<\/em> vol. <span class=\"vol\">8, num.<\/span>&nbsp;<span class=\"citedIssue\">6, pp.<\/span> e11371, 2020.<\/p>\n\n\n\n<p>G. Yu, A. Zare, H. Sheng, R. Matamala, J. Reyes-Cabrera, F. B. Fritschi and T.E. Juenger, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/03\/4260\/\">Root Identification in Minirhizotron Imagery with Multiple Instance Learning<\/a>,\u201d in <em>Machine Vision and Applications,&nbsp;<\/em>vol. 31, 2020.<\/p>\n\n\n\n<p>W. Xu, G. Yu, A. Zare, B. Zurweller, D. Rowland, J. Reyes-Cabrera, F. Fritschi, R. Matamala and T. Juenger, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/03\/overcoming-small-minirhizotron-datasets-using-transfer-learning\/\">Overcoming Small Minirhizotron Datasets Using Transfer Learning<\/a>,\u201d in <em>Computers and Electronics in Agriculture, vol. 175, 2020<\/em>.<\/p>\n\n\n\n<p>B. Weinstein, S. Marconi, S. Bohlman, A. Zare, E. White, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/10\/geographic-generalization-in-airborne-rgb-deep-learning-tree-detection\/\">&#8220;Cross-site learning in deep learning RGB tree crown detection,&#8221;<\/a> in <em>Ecological Informatics, vol. 56, 2020<\/em>.<\/p>\n\n\n\n<p>X. Du and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/05\/du2018multi\/\">Multi-resolution Multi-modal Sensor Fusion For Remote Sensing Data with Label Uncertainty<\/a>,\u201d in <em>IEEE Trans. on Geoscience and Remote Sensing (TGRS),&nbsp;vol. 58, no. 4, pp. 2755-2769, April 2020.<\/em><\/p>\n\n\n\n<p><a name=\"#2019\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2019<\/h2>\n\n\n\n<p>H. Sheng, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/01\/switchgrass-genotype-classification-using-hyperspectral-imagery\/\">\u201cSwitchgrass Genotype Classification using Hyperspectral Imagery,\u201d<\/a> M.Sc. Thesis, Gainesville, FL, 2019.<\/p>\n\n\n\n<p>P. Lyons, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2020\/01\/anomaly-and-target-detection-in-synthetic-aperture-sonar\/\">\u201cAnomaly and Target Detection in Synthetic Aperture Sonar,\u201d<\/a> M.Sc. Thesis, Gainesville, FL, 2019.<\/p>\n\n\n\n<p>C. Ruben, S. Dhulipala, K. Nagaraj, S. Zou. A. Starke, A. Bretas, A. Zare, and J. McNair, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/?p=5392&amp;preview=true\">&#8220;Hybrid data-driven physics model-based framework for enhanced cyber-physical smart grid security,&#8221;<\/a> in <em>IET Smart Grid Special Issue: Machine Learning in Power Systems<\/em>. Dec 2019.<\/p>\n\n\n\n<p>X. Du, A. Zare and D. Anderson,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/09\/multiple-instance-choquet-integral-with-binary-fuzzy-measures-for-remote-sensing-classifier-fusion-with-imprecise-labels\/\"> &#8220;Multiple Instance Choquet Integral with Binary Fuzzy Measures for Remote Sensing Classifier Fusion with Imprecise Labels,&#8221;<\/a> The 2019 IEEE Symposium Series on Computational Intelligence (IEEE SSCI). Xiamen, China. Dec. 2019. pp. 1154-1162.<\/p>\n\n\n\n<p>S. Meerdink, J. Bocinsky, E. Wetherley, A. Zare, C. McCurley, and P. Gader, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/developing-spectral-libraries-using-multiple-target-multiple-instance-adaptive-cosine-coherence-estimator\/\">\u201cDeveloping Spectral Libraries Using Multiple Target Multiple Instance Adaptive Cosine\/Coherence Estimator,\u201d<\/a>&nbsp; 10th Workshop on Hyperspectral Imaging and Signal Processing: Evolution in Remote Sensing (WHISPERS), pp. 1-5, Sept. 2019.<\/p>\n\n\n\n<p>R. Fick, P. Gader, A. Zare, and S. Meerdink,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/temporal-mapping-of-hyperspectral-data\/\"> &#8220;Temporal mapping of hyperspectral data&#8221;<\/a>, 10th Workshop on Hyperspectral Imaging and Signal Processing: Evolution in Remote Sensing (WHISPERS), pp. 1-4, Sept. 2019.<\/p>\n\n\n\n<p>S. Zou, Y. Tseng, A. Zare, D. Rowland, B. Tillman and S. Yoon, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/10\/peanut-maturity-classification-using-hyperspectral-imagery\/\">\u201cPeanut Maturity Classification using Hyperspectral Imagery,\u201d<\/a> in <em>Biosystems Engineering<\/em>, vol. 188, pp. 165-177, 2019.<\/p>\n\n\n\n<p>S. K. Meerdink, D. A. Roberts, K. L. Roth, J. Y. King, P. D. Gader, and A. Koltunov,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/classifying-california-plant-species-temporally-using-airborne-hyperspectral-imagery\/\"> &#8220;Classifying California plant species temporally using airborne hyperspectral imagery,&#8221;<\/a> in <em>Remote Sensing of Environment<\/em>, vol. 232 (111308), Oct 2019.<\/p>\n\n\n\n<p>S. K. Meerdink, S. J. Hook, D. A. Roberts, and E. A. Abbott, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/the-ecostress-spectral-library-version-1-0-remote-sensing-of-environment\/\">&#8220;The ECOSTRESS spectral library version 1.0,&#8221;<\/a> in <em>Remote Sensing of Environment<\/em>, vol. 230 (111196), Sept. 2019.<\/p>\n\n\n\n<p>R. H. J. Heim, A. J. Carnegie, and P. J. Zarco-Tejada, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/breaking-down-barriers-between-remote-sensing-and-plant-pathology\/\">&#8220;Breaking down barriers between remote sensing and plant pathology,&#8221;<\/a> in <em>Tropical Plant Pathology,<\/em> vol. 44, pp. 398\u2013400, July 2019.<\/p>\n\n\n\n<p>S. Meerdink,&nbsp; D. Roberts, G. Hulley, P. Gader,&nbsp; J. Pisek, K. Adamson, and S. J. Hook,&nbsp; <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/plant-species-spectral-emissivity-and-temperature-using-the-hyperspectral-thermal-emission-spectrometer-hytes-sensor\/\">&#8220;Plant species\u2019 spectral emissivity and temperature using the hyperspectral thermal emission spectrometer (HyTES) sensor,&#8221;<\/a> in <em>Remote Sensing of Environment<\/em>, vol. 224, pp. 421\u2013435, Apr 2019.<\/p>\n\n\n\n<p>B. Weinstein, S. Marconi, S. Bohlman, A. Zare and E. White, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/04\/individual-tree-crown-detection-in-rgb-imagery-using-self-supervised-deep-learning-neural-networks\/\">Individual tree-crown detection in RGB imagery using semi-supervised deep learning neural networks<\/a>,\u201d in <em>Remote Sensing<\/em>. 2019. vol 11. issue 11. pp 1309.&nbsp;<\/p>\n\n\n\n<p>A. Galusha, J. Keller, A. Zare,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/deep-convolutional-neural-network-target-classification-for-underwater-synthetic-aperture-sonar-imagery\/\"> \u201cDeep Convolutional Neural Network Target Classification for Under- water Synthetic Aperture Sonar Imagery,\u201d<\/a> SPIE Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIV, Baltimore, MD, April 2019.<\/p>\n\n\n\n<p>J. Dale, A. Galusha, J. Keller, A. Zare,<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/08\/evaluation-of-image-features-for-discriminating-targets-from-false-positives-in-synthetic-aperture-sonar-imagery\/\"> \u201cEvaluation of Image Features for Discriminating Targets from False Positives in Synthetic Aperture Sonar Imagery,\u201d<\/a> SPIE Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIV, Baltimore, MD, April 2019.<\/p>\n\n\n\n<p>J. Bocinsky, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/04\/learning-multiple-target-concepts-from-uncertain-ambiguous-data-using-the-adaptive-cosine-estimator-and-spectral-match-filter\/\">Learning Multiple Target Concepts from Uncertain, Ambiguous Data Using the Adaptive Cosine Estimator and Spectral Match Filter<\/a>,\u201d M.Sc. Thesis, Gainesville, FL, 2019.<\/p>\n\n\n\n<p>J. Bocinsky, C. McCurley, D. Shats and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/04\/investigation-of-initialization-strategies-for-the-multiple-instance-adaptive-cosine-estimator\/\">Investigation of Initialization Strategies for the Multiple Instance Adaptive Cosine Estimator<\/a>,\u201d in Proc. SPIE 11012, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIV, 2019.<\/p>\n\n\n\n<p>J. Peeples, M. Cook, D. Suen, A. Zare and J. Keller, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/04\/comparison-of-possibilistic-fuzzy-local-information-c-means-and-possibilistic-k-nearest-neighbors-for-synthetic-aperture-sonar-image-segmentation\/\">Comparison of Possibilistic Fuzzy Local Information C-Means and Possibilistic K-Nearest Neighbors for Synthetic Aperture Sonar Image Segmentation<\/a>,\u201d in Proc. SPIE 11012, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIV, 2019.<\/p>\n\n\n\n<p>C. McCurley, J. Bocinsky, A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/03\/comparison-of-hand-held-wemi-target-detection-algorithms\/\">Comparison of Hand-held WEMI Target Detection Algorithms<\/a>,\u201d in Proc. SPIE 11012, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIV, 2019.<\/p>\n\n\n\n<p>X. Du and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/03\/du2018multiple\/\">Multiple Instance Choquet Integral Classifier Fusion and Regression for Remote Sensing Applications<\/a>,\u201d IEEE Transactions on Geoscience and Remote Sensing, vol. 57, pp. 2741-2753, May 2019.<\/p>\n\n\n\n<p>S. Zou, P. Gader and A. Zare, &#8220;<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/07\/hyperspectral-tree-crown-classification-using-the-multipleinstance-adaptive-cosine-estimator\/\">Hyperspectral Tree Crown Classification Using the Multiple Instance Adaptive Cosine Estimator<\/a>,\u201d PeerJ 7:e6405, Feb. 2019.<\/p>\n\n\n\n<p><a name=\"#2018\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2018<\/h2>\n\n\n\n<p>S. Avusali, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/03\/three-dimensional-reconstruction-of-plant-roots-via-low-energy-x-ray-computed-tomography\/\">Three Dimensional Reconstruction of Plant Roots via Low Energy X-ray Computed Tomography<\/a>,\u201d M.Sc. Thesis, Columbia, MO, 2018.<\/p>\n\n\n\n<p>W. Chen, S. Gou, X. Wang, L. Jiao, C. Jiao, A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2019\/01\/complex-scene-classification-of-polsar-imagery-based-on-a-self-paced-learning-approach\/\">Complex Scene Classification of PoLSAR Imagery Based on a Self-Paced Learning Approach<\/a>,\u201d <em> IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing<\/em>, vol. 11, pp. 4818 &#8211; 4825, Dec. 2018.<\/p>\n\n\n\n<p>C. Jiao, C. Chen, R. McGarvey, S. Bohlman, L. Jiao and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/10\/jiao2017multiple-3\/\">Multiple Instance Hybrid Estimator for Hyperspectral Target Characterization and Sub-pixel Target Detection<\/a>,\u201d<em>ISPRS Journal of Photogrammetry and Remote Sensing<\/em>, vol. 146, pp. 235 &#8211; 250, Dec. 2018.<\/p>\n\n\n\n<p>T. Liu, A. Abd-Elrahman, A. Zare, B. Dewitt, L. Flory, and S. Smith \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/07\/a-fully-learnable-context-driven-object-based-model-for-mapping-land-cover-using-multi-view-data-from-unmanned-aircraft-systems\/\">A Fully Learnable Context-driven Object-based Model for Mapping Land Cover Using Multi-view Data from Unmanned Aircraft Systems<\/a>,\u201d <em>Remote Sensing of Environment<\/em>, vol. 216, pp. 328-344, Oct. 2018.<\/p>\n\n\n\n<p>A. Starke, J. McNair, R. Trevizan, A. Bretas, J. Peeples, and A. Zare \u201cToward Resilient Smart Grid Communications Using Distributed SDN with ML-based Anomaly Detection,\u201d in The 16th International Conference on Wired\/Wireless Internet Communications, Boston, MA, Jun. 2018.<\/p>\n\n\n\n<p>S. Zou, H. Sun, and A. Zare \u201cHyperspectral Unmixing with Endmember Variability Using Semi-supervised Partial Membership Latent Dirichlet Allocation,\u201d in American Association of Geographers, New Orleans, LA, Apr. 2018. Abstract and Presentation Only.<\/p>\n\n\n\n<p>D. Stewart, A. Zare, and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/04\/stewart2018superpixelmetrics\/\">Quantitative Evaluation Metrics for Superpixel Segmentation<\/a>\u201d in Proc. SPIE 10628, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>J. Baciak, S. Cui, H. Gardiner, S. Kovaleski, and A. Zare, \u201cUse of Pencil Beam Backscatter Radiography to Image Buried Root Structures,&#8221; in Symp. on Radiation Measurements and Applications XVII, Ann Arbor, MI, June 2018.<\/p>\n\n\n\n<p>T. Nabelek, J. Keller, A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/05\/2018fractalanalysis\/\">Fractal Analysis of Seafloor Textures for Target Detection in Synthetic Aperture Sonar Imagery<\/a>,\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>A. Galusha, G. Galusha, J. Keller, A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/05\/2018sas\/\">A Target Classification Algorithm for Underwater Synthetic Aperture Sonar Imagery<\/a>,\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>B. Alvey, D. Ho, A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/05\/2018samplespacing\/\">Sample Spacing Variations on the Feature Performance for Subsurface Object Detection Using Handheld Ground Penetrating Radar<\/a>,\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>P. Lyons, D. Suen, A. Galusha, A. Zare, and J. Keller, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/03\/lyons2018ace\/\/\">Comparison of Prescreening Algorithms for Target Detection in Synthetic Aperture Sonar Imagery<\/a>,\u201d in Proc. SPIE 10628, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>J. Peeples, D. Suen, A. Zare, and J. Keller, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/03\/peeples2018feature_selection\/\">Possibilistic Fuzzy Local Information C-means with Automated Feature Selection for Seafloor Segmentation<\/a>,\u201d in Proc. SPIE 10628, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXIII, 2018.<\/p>\n\n\n\n<p>C. Jiao, B. Su, P. Lyons, A. Zare, K. C. Ho and M. Skubic, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/06\/jiao2017multiple-2\/\">Multiple Instance Dictionary Learning for Beat-to-Beat Heart Rate Monitoring from Ballistocardiograms<\/a>,\u201d<em> IEEE Trans. Biomed. Eng.<\/em>, vol. 65, pp. 2634 &#8211; 2648, Nov. 2018.<\/p>\n\n\n\n<p>A. Zare, C. Jiao, and T. Glenn, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/09\/zare2016miace\/\">Discriminative Multiple Instance Hyperspectral Target Characterization<\/a>,\u201d <em>IEEE Trans. Pattern Anal. Mach. Intell.<\/em>, vol. 40, pp. 2342 &#8211; 2354, Oct. 2018.<\/p>\n\n\n\n<p><a name=\"#2017\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2017<\/h2>\n\n\n\n<p>X. Du, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/12\/multiple-instance-choquet-integral-for-multiresolution-sensor-fusion\/\">Multiple Instance Choquet Integral For Multi-Resolution Sensor Fusion<\/a>,\u201d Ph.D. Thesis, Columbia, MO, 2017.<\/p>\n\n\n\n<p>C. Jiao, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/12\/target-concept-learning-ambiguously-labeled-data\/\">Target Concept Learning From Ambiguously Labeled Data<\/a>,\u201d Ph.D. Thesis, Columbia, MO, 2017.<\/p>\n\n\n\n<p>A. Zare, N. Young, D. Suen, T. Nabelek, A. Galusha, J. Keller, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/10\/zare2017possibilistic\/\">Possibilistic Fuzzy Local Information C-Means for Sonar Image Segmentation<\/a>,\u201d in <em>IEEE Symp. Series on Computational Intelli.<\/em>, Honolulu, Hi, 2017.<\/p>\n\n\n\n<p>C. Chen, A. Zare, H. Trinh, G. Omotara, J. T. Cobb, and P. Lagaunne, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/12\/chen2016partial-2\/\">Partial Membership Latent Dirichlet Allocation<\/a>,\u201d <em>IEEE Trans. Image Process.<\/em>, vol. 26, pp. 5590-5602, Dec. 2017.<\/p>\n\n\n\n<p>A. J. Pinar, D. T. Anderson, T. C. Havens, A. Zare and T. Adeyeba, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/06\/pinar2017measures\/\">Measures of the Shapley Index for Learning Lower Complexity Fuzzy Integrals<\/a>\u201d Granular Computing (2017): 1-17<\/p>\n\n\n\n<p>R. E. Smith, D. T. Anderson, J. E. Ball, A. Zare and B. Alvey, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/05\/smith2017aggregation\/\">Aggregation of Choquet Integrals in GPR and EMI for Handheld Platform-based Explosive Hazard Detection<\/a>\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXII, 2017.<\/p>\n\n\n\n<p>S. Harris, B. Alvey, D. Ho and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/04\/samuel2017lbp\/\">LBP Features for Hand-Held Ground Penetrating Radar<\/a>\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXII, 2017.<\/p>\n\n\n\n<p>B. Alvey, A. Zare and D. Ho, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/04\/brendan2017fourier\/\">Fourier Features for Explosive Hazard Detection Using a Wideband Electromagnetic Induction Sensor<\/a>\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXII, 2017.<\/p>\n\n\n\n<p>D. T. Anderson, M. A. Islam, R. King, N. H. Younan, J. R. Fairley, S. Howington, F. Petry, P. Elmore and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/03\/anderson2017binary\/\">Binary Fuzzy Measures and Choquet Integration for Multi-Source Fusion<\/a>\u201d Intl. Conf. on Military Technologies, 2017.<\/p>\n\n\n\n<p>R. Smith, D. Anderson, A. Zare, J. Ball, B. Alvey, J. Fairley, and S. Howington, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/03\/smith2017genetic\/\">Genetic Programming Based Choquet Integral for Multi-Source Fusion <\/a>\u201d in <em> IEEE Int. Conf. Fuzzy Syst. <\/em>, Naples, Italy, 2017, pp. 1-8.<\/p>\n\n\n\n<p>X. Du, A. Seethepalli, H. Sun, A. Zare and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/03\/du2017environmentally\/\">Environmentally-Adaptive Target Recognition for SAS Imagery <\/a>\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXII, 2017.<\/p>\n\n\n\n<p>J. T. Cobb, X. Du, A. Zare, and M. Emigh, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/03\/cobb2017multiple\/\">Multiple-instance Learning-based Sonar Image Classification <\/a>\u201d in Proc. SPIE 10182, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXII, 2017.<\/p>\n\n\n\n<p>C. Jiao and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/01\/jiao2017multiple\/\">Multiple Instance Hybrid Estimator for Learning Target Signatures<\/a>\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Fort Worth, TX, 2017<\/p>\n\n\n\n<p>H. Sun and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/01\/sun2017map\/\">Map-guided Hyperspectral Image Superpixel Segmentation Using Proportion Maps<\/a>\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Fort Worth, TX, 2017<\/p>\n\n\n\n<p>S. Zou and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/09\/sheng2016hyperspectral\/\">Hyperspectral Unmixing with Endmember Variability Using Partial Membership Latent Dirichlet Allocation<\/a>.\u201d in <em>IEEE Int. Conf. Acoust, Speech and Signal Process. (ICASSP)<\/em>, New Orleans, LA, 2017, pp. 6200-6204.<\/p>\n\n\n\n<p>S. Zou, H. Sun, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2017\/03\/zou2017hyperspectral\/\">Hyperspectral Unmixing with Endmember Variability Using Semi-supervised Partial Membership Latent Dirichlet Allocation,<\/a>\u201d in <em>CoRR<\/em>. vol abs\/1703.06151. 2017.&nbsp;&nbsp;<\/p>\n\n\n\n<p><a name=\"#2016\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2016<\/h2>\n\n\n\n<p>A. Seethepalli, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/12\/seethepalli2016multi\/\">Multi-camera High-throughput Plant Root Phenotyping System<\/a>,\u201d M.Sc. Thesis, Columbia, MO, 2016.<\/p>\n\n\n\n<p>H. Sun, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/12\/sun2016map\/\">Map-guided Hyperspectral Image Superpixel Segmentation Using Semi-supervised Partial Membership Latent Dirichlet Allocation<\/a>,\u201d M.Sc. Thesis, Columbia, MO, 2016.<\/p>\n\n\n\n<p>S. Zou, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/12\/zou2016semi\/\">Semi-supervised Interactive Unmixing for Hyperspectral Image Analysis<\/a>,\u201d M.Sc. Thesis, Columbia, MO, 2016.<\/p>\n\n\n\n<p>B. Alvey, A. Zare, M. Cook, and D. Ho, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/04\/alvey2016adaptive\/\">Adaptive Coherence Estimator (ACE) for Explosive Hazard Detection Using Wideband Electromagnetic Induction (WEMI)<\/a>,\u201d in Proc. SPIE 9823, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXI, 2016.<\/p>\n\n\n\n<p>J. Bezdek, X. Ye, M. Popescu, J. Keller and A. Zare, &#8220;<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/11\/bezdek2016random\/\">Random Projection Below the JL Limit<\/a>,&#8221; 2016 International Joint Conference on Neural Networks (IJCNN), Vancouver, BC, Canada, 2016, pp. 2414-2423.<\/p>\n\n\n\n<p>C. Chen, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/05\/chen2016partial\/\">Partial Membership Latent Dirichlet Allocation<\/a>,\u201d PhD Thesis, Columbia, MO, 2016.<\/p>\n\n\n\n<p>C. Chen, A. Zare, and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/09\/chen2016partialicpr\/\">Partial Membership Latent Dirichlet Allocation for Image Segmentation<\/a>,\u201d in Int. Conf. Pattern Recognition (ICPR), 2016.<\/p>\n\n\n\n<p>M. Cook, A. Zare, and D. Ho, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/04\/cook2016buried\/\">Buried Object Detection Using Handheld WEMI with Task-driven Extended Functions of Multiple Instances<\/a>,\u201d in Proc. SPIE 9823, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXI, 2016.<\/p>\n\n\n\n<p>X. Du, A. Zare, J. Keller, and D. Anderson, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/07\/du2016multiple\/\">Multiple Instance Choquet Integral for Classifier Fusion<\/a>,\u201d in <em> IEEE Congr. Evol. Computation (CEC)<\/em>, Vancouver, BC, 2016, pp. 1054-1061.<\/p>\n\n\n\n<p>S. Harris, D. Ho, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/04\/harris2016on\/\">On the Use of Log-gabor Features for Subsurface Object Detection Using Ground Penetrating radar<\/a>,\u201d in Proc. SPIE 9823, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XXI, 2016.<\/p>\n\n\n\n<p>R. Heylen, P. Scheunders, A. Zare, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/07\/heylen2016alternating\/\">Alternating Angle Minimization Based Unmixing with Endmember Variability<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Beijing, 2016, pp. 6974-6977.<\/p>\n\n\n\n<p>R. Heylen, A. Zare, P. Gader, and P. Scheunders, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/08\/heylen2016hyperspectral\/\">Hyperspectral Unmixing With Endmember Variability via Alternating Angle Minimization<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 54, pp. 4983-4993, Aug. 2016.<\/p>\n\n\n\n<p>C. Jiao, P. Lyons, A. Zare, L. Rosales, and M. Skubic, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/08\/jiao2016heartbeat\/\">Heart Beat Characterization from Ballistocardiogram Signals using Extended Functions of Multiple Instances<\/a>,\u201d in Proc. EMBC, 2016.<\/p>\n\n\n\n<p>C. Jiao and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/09\/jiao2016multipleicpr\/\">Multiple Instance Dictionary Learning using Functions of Multiple Instances<\/a>,\u201d in Int. Conf. Pattern Recognition (ICPR), 2016.<\/p>\n\n\n\n<p>S. Zou and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2016\/04\/zou2016instance\/\">Instance Influence Estimation for Hyperspectral Target Signature Characterization Using Extended Functions of Multiple Instances<\/a>,\u201d in Proc. SPIE 9840, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XXII, 2016.<\/p>\n\n\n\n<p><a name=\"#2015\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2015<\/h2>\n\n\n\n<p>C. Chen, A. Zare, and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/10\/chen2015sand\/\">Sand Ripple Characterization Using an Extended Synthetic Aperture Sonar Model and Parallel Sampling Method<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 53, pp. 5547-5559, Oct. 2015.<\/p>\n\n\n\n<p>M. Cook, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/12\/cook2015task\/\">Task Driven Extended Functions of Multiple Instances<\/a>,\u201d Master Thesis, Columbia, MO, 2015.<\/p>\n\n\n\n<p>X. Du, A. Zare, and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/05\/du2015possibilistic\/\">Possibilistic context identification for SAS imagery<\/a>,\u201d in Proc. SPIE 9454, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XX, 2015.<\/p>\n\n\n\n<p>T. C. Glenn, A. Zare, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/10\/glenn2015bayesian\/\">Bayesian Fuzzy Clustering<\/a>,\u201d <em>IEEE Trans. Fuzzy Syst.<\/em>, vol. 23, pp. 1545-1561, Oct. 2015.<\/p>\n\n\n\n<p>T. C. Glenn and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/06\/glenn2015estimating\/\">Estimating Target Signatures with Diverse Density<\/a>,\u201d in 7th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2015.<\/p>\n\n\n\n<p>K. C. Ho, S. Harris, A. Zare, and M. Cook, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/05\/ho2015anomaly\/\">Anomaly detection of subsurface objects using handheld ground-penetrating radar<\/a>,\u201d in Proc. SPIE 9454, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XX, 2015.<\/p>\n\n\n\n<p>C. Jiao and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/08\/jiao2015functions\/\">Functions of Multiple Instances for Learning Target Signatures<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 53, pp. 4670-4686, Aug. 2015.<\/p>\n\n\n\n<p>M. Popescu, J. Keller, J. Bezdek, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/08\/popescu2015random\/\">Random Projections Fuzzy C-means (RPFCM) for Big Data Clustering<\/a>,\u201d in <em>IEEE Int. Conf. Fuzzy Syst. (FUZZ-IEEE)<\/em>, Istanbul, 2015, pp. 1-6.<\/p>\n\n\n\n<p>A. Zare and C. Jiao, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/05\/zare2015functions\/\">Functions of Multiple Instances for Sub-pixel Target Characterization in Hyperspectral Imagery<\/a>,\u201d in Proc. SPIE 9472, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XXI, 2015.<\/p>\n\n\n\n<p>A. Zare, M. Cook, B. Alvey, and D. Ho, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2015\/05\/zare2015multiple\/\">Multiple Instance Dictionary Learning for Subsurface Object Detection Using Handheld EMI<\/a>,\u201d in Proc. SPIE 9454, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XX, 2015.<\/p>\n\n\n\n<p><a name=\"#2014\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2014<\/h2>\n\n\n\n<p>A. Buck, A. Zare, J. Keller, and M. Popescu, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/12\/buck2014endmember\/\">Endmember Representation of Human Geography Layers<\/a>,\u201d in <em>IEEE Symp. Computational Intell. Big Data (CIBD)<\/em>, Orlando, FL, 2014, pp. 1-6.<\/p>\n\n\n\n<p>C. Chen, A. Zare, and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/09\/chen2014invariant\/\">Invariant Parameter Estimation Across Varying Seabeds in Synthetic Aperture Sonar Imagery<\/a>,\u201d in 3rd Int. Conf. on SAS and SAR, 2014.<\/p>\n\n\n\n<p>J. T. Cobb and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/09\/cobb2014boundary\/\">Boundary Detection and Superpixel Formation in Synthetic Aperture Sonar Imagery<\/a>,\u201d in 3rd Int. Conf. SAS and SAR, 2014.<\/p>\n\n\n\n<p>X. Du, A. Zare, P. Gader, and D. Dranishnikov, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/06\/du2014spatial\/\">Spatial and Spectral Unmixing Using the Beta Compositional Model<\/a>,\u201d <em>IEEE J. Sel. Topics. Appl. Earth Observ.<\/em>, vol. 7, pp. 1994-2003, June, 2014.<\/p>\n\n\n\n<p>J. Keller, A. Buck, A. Zare, and M. Popescu, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/12\/keller2014human\/\">A Human Geospatial Predictive Analytics Framework with Application to Finding Medically Underserved Areas<\/a>,\u201d in <em>IEEE Symp. Computational Intell. Big Data (CIBD)<\/em>, Orlando, FL, 2014, pp. 1-6.<\/p>\n\n\n\n<p>P. Khopkar, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/05\/khopkar2014hyperspectral\/\">Hyperspectral Unmixing and Band Weighting for Multiple Endmember Sets<\/a>,\u201d Master Thesis, Columbia, MO, 2014.<\/p>\n\n\n\n<p>P. Massoudifar, A. Rangarajan, A. Zare, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning2014\/06\/massoudifar2014integrated\/\">An Integrated Graph Cuts Segmentation and Piece-wise Convex Unmixing Approach for Hyperspectral Imaging<\/a>,\u201d in 6th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2014.<\/p>\n\n\n\n<p>Y. Wang, Y. Li, K. C. Ho, A. Zare, and M. Skubic, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/08\/wang2014sparsity\/\">Sparsity Promoted Non-negative Matrix Factorization for Source Separation and Detection<\/a>,\u201d in 19th Int. Conf. Digital Signal Proc. (DSP), 2014, pp. 640-645.<\/p>\n\n\n\n<p>A. Zare and D. T. Anderson, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/06\/zare2014earth\/\">Earth Movers Distance-based Simultaneous Comparison of Hyperspectral Endmembers and Proportions<\/a>,\u201d <em>IEEE J. Sel. Topics. Appl. Earth Observ.<\/em>, vol. 7, pp. 1910-1921, June 2014.<\/p>\n\n\n\n<p>A. Zare and K. C. Ho, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/01\/zare2014endmember\/\">Endmember Variability in Hyperspectral Analysis: Addressing Spectral Variability During Spectral Unmixing<\/a>,\u201d <em>IEEE Signal Process. Mag.<\/em>, vol. 31, pp. 95-104, Jan. 2014.<\/p>\n\n\n\n<p>A. Zare and C. Jiao, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2014\/06\/zare2014extended\/\">Extended Functions of Multiple Instances for Target Characterization<\/a>,\u201d in 6th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2014.<\/p>\n\n\n\n<p>&nbsp;<\/p>\n\n\n\n<p><a name=\"#2013\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2013<\/h2>\n\n\n\n<p>D. T. Anderson, A. Zare, and S. Price, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/08\/anderson2013comparing\/\">Comparing Fuzzy, Probabilistic, and Possibilistic Partitions Using the Earth Mover\u2019s Distance<\/a>,\u201d <em>IEEE Trans. Fuzzy Syst.<\/em>, vol. 21, pp. 766-775, Aug. 2013.<\/p>\n\n\n\n<p>J. T. Cobb and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/06\/cobb2013multi\/\">Multi-Image Texton Selection for Sonar Image Seabed Co-segmentation<\/a>,\u201d in Proc. SPIE 8709, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XVIII, 2013.<\/p>\n\n\n\n<p>D. Dranishnikov, P. Gader, A. Zare, and T. Glenn, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/09\/dranishnikov2013unmixing\/\">Unmixing Using a Combined Microscopic and Macroscopic Mixture Model with Distinct Endmembers<\/a>,\u201d in 21st European Signal Proc. Conf. (EUSPICO), 2013.<\/p>\n\n\n\n<p>X. Du, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/12\/du2013accounting\/\">Accounting for Spectral Variability in Hyperspectral Unmixing Using Beta Endmember Distribution<\/a>,\u201d Master Thesis, Columbia, MO, 2013.<\/p>\n\n\n\n<p>J. Dula, A. Zare, D. Ho, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/06\/dula2013landmine\/\">Landmine Classification Using Possibilistic K-nearest Neighbors with Wideband Electromagnetic Induction Data<\/a>,\u201d in Proc. SPIE 8709 Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XVIII, 2013.<\/p>\n\n\n\n<p>T. Glenn, D. Dranishnikov, P. Gader, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/07\/glenn2013subpixel\/\">Subpixel Target Detection in Hyperspectral Imagery Using Piece-wise Convex Spatial-spectral Unmixing, Possibilistic and Fuzzy Clustering, and Co-registered LiDAR<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp.(IGARSS))<\/em>, Melbourne, VIC, 2013, pp. 1063-1066.<\/p>\n\n\n\n<p>P. Khopkar and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/07\/khopkar2013simultaneous\/\">Simultaneous Band-weighting and Spectral Unmixing for Multiple Endmember Sets<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Melbourne, VIC, 2013, pp. 2164-2167.<\/p>\n\n\n\n<p>H. Kwon, X. Hu, J. Theiler, A. Zare, and P. Gurram, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/11\/kwon2013algorithms\/\">Editorial: Algorithms for Multispectral and Hyperspectral Image Analysis<\/a>,\u201d J. Electr. Computer Eng., vol. 2013, 2013.<\/p>\n\n\n\n<p>M. Popescu, J. Keller, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/04\/popescu2013framework\/\">A Framework for Computing Crowd Emotions Using Agent Based Modeling<\/a>,\u201d in <em>IEEE Symp. Computational Intelli. Creativity and Affective Computing (CICAC)<\/em>, Singapore, 2013, pp. 25-31.<\/p>\n\n\n\n<p>A. Zare, P. Gader, D. Dranishnikov, and T. Glenn, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning2013\/06\/zare2013beta\/\">Spectral Unmixing Using the Beta Compositional Model<\/a>,\u201d in 5th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2013.<\/p>\n\n\n\n<p>A. Zare, P. Gader, O. Bchir, and H. Frigui, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/05\/zare2013piecewise\/\">Piecewise Convex Multiple-model Endmember Detection and Spectral Unmixing<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 51, pp. 2853-2862, May 2013.<\/p>\n\n\n\n<p>A. Zare, P. Gader, and G. Casella, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/03\/zare2013sampling\/\">Sampling Piecewise Convex Unmixing and Endmember Extraction<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 51, pp. 1655-1665, Mar. 2013.<\/p>\n\n\n\n<p>A. Zare and J. T. Cobb, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2013\/09\/zare2013sand\/\">Sand Ripple Characterization Using an Extended Synthetic Aperture Sonar Model and MCMC Sampling Methods<\/a>,\u201d in IEEE OCEANS &#8211; San Diego, CA, 2013, pp. 1-7.<\/p>\n\n\n\n<p><a name=\"#2012\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2012<\/h2>\n\n\n\n<p>D. T. Anderson and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/08\/anderson2012spectral\/\">Spectral Unmixing Cluster Validity Index for Multiple Sets of Endmembers<\/a>,\u201d <em>IEEE J. Sel. Topics. Appl. Earth Observ.<\/em>, vol. 5, pp. 1282-1295, Aug. 2012.<\/p>\n\n\n\n<p>R. Close, P. Gader, A. Zare, J. Wilson, and D. Dranishnikov, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/10\/close2012endmember\/\">Endmember Extraction Using the Physics-based Multi-mixture Pixel Model<\/a>,\u201d in Proc. SPIE 8515, Imaging Spectrometry XVII, 2012.<\/p>\n\n\n\n<p>R. Close, P. Gader, J. Wilson, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/05\/close2012using\/\">Using Physics-based Macroscopic and Microscopic Mixture Models for Hyperspectral Pixel Unmixing<\/a>,\u201d in Proc. SPIE 8390, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XVIII, 2012.<\/p>\n\n\n\n<p>J. Dula, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learninge\/2012\/12\/dula2012landmine\/\">Landmine Classification Using Possibilistic K-nearest Neighbors with Wideband Electromagnetic Induction Data<\/a>,\u201d Master Thesis, Columbia, MO, 2012.<\/p>\n\n\n\n<p>P. Gader, D. Dranishnikov, A. Zare, and J. Chanussot, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/06\/gader2012sparsity\/\">A Sparsity Promoting Bilinear Unmixing Model<\/a>,\u201d in 4th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2012.<\/p>\n\n\n\n<p>N. Longbotham, F. Pacifici, T. Glenn, A. Zare, M. Volpi, D. Tuia, E. Christophe, J. Michel, J. Inglada, J. Chanussot, and Q. Du, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/02\/longbotham2012multi\/\">Multi-modal Change Detection, Application to the Detection of Flooded Areas: Outcome of the 2009-2010 Data Fusion Contest<\/a>,\u201d <em>IEEE J. Sel. Topics Appl. Earth Observ.<\/em>, vol. 5, pp. 331-342, Feb. 2012.<\/p>\n\n\n\n<p>A. Zare, Z. Fields, J. Keller, and J. Horton, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/07\/zare2012agent\/\">Agent-based Rumor Spreading Models for Human Geography Applications<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Munich, 2012, pp. 5394-5397.<\/p>\n\n\n\n<p>A. Zare, P. Gader, T. Allgire, D. Drashnikov, and R. Close, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/06\/zare2012bootstrapping\/\">Bootstrapping for Piece-wise Convex Endmember Distribution Detection<\/a>,\u201d in 4th IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2012.<\/p>\n\n\n\n<p>A. Zare, P. Gader, and K. S. Gurumoorthy, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/05\/zare2012directly\/\">Directly Measuring Material Proportions Using Hyperspectral Compressive Sensing<\/a>,\u201d <em>IEEE Geosci. Remote Sens. Lett.<\/em>, vol. 9, pp. 323-327, May 2012.<\/p>\n\n\n\n<p>A. Zare, O. Bchir, H. Frigui, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2012\/10\/zare2012hyperspectral\/\">Hyperspectral Image Analysis with Piece-wise Convex Endmember Estimation and Spectral Unmixing<\/a>,\u201d in <em>19th IEEE Int. Conf. Image Proc. (ICIP)<\/em>, Orlando, FL, 2012, pp. 2681-2684.<\/p>\n\n\n\n<p><a name=\"#2011\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2011<\/h2>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2011\/05\/zare2011multiclass\/\">Multiclass Subpixel Target Detection Using Functions of Multiple Instances<\/a>,\u201d in Proc. SPIE 8048, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XVII, 2011.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2011\/06\/zare2011piece\/\">Piece-wise Convex Spatial-spectral Unmixing of Hyperspectral Imagery Using Possibilistic and Fuzzy Clustering<\/a>,\u201d in <em>IEEE Int. Conf. Fuzzy Systems (FUZZ-IEEE)<\/em>, Taipei, 2011, pp. 741-746.<\/p>\n\n\n\n<p>A. Zare, M. Weiss, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2011\/03\/zare2011rebuilding\/\">Rebuilding the Injured Brain: Use of MRS in Clinical Regenerative Medicine<\/a>,\u201d in Proc. SPIE 7965, Medical Imaging 2011: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2011.<\/p>\n\n\n\n<p>A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2011\/07\/zare2011spatial\/\">Spatial-spectral Unmixing Using Fuzzy Local Information<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Vancouver, BC, 2011, pp. 1139-1142.<\/p>\n\n\n\n<p>A. Zare, P. Gader, J. Bolton, S. Yuksel, T. Dubroca, R. Close, and R. Hummel, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2011\/06\/zare2011sub\/\">Sub-pixel Target Spectra Estimation and Detection Using Functions of Multiple Instances<\/a>,\u201d in 3rd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2011.<\/p>\n\n\n\n<p><a name=\"#2010\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2010<\/h2>\n\n\n\n<p>O. Bchir, H. Frigui, A. Zare, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/06\/bchir2010multiple\/\">Multiple Model Endmember Detection Based on Spectral and Spatial Information<\/a>,\u201d in 2nd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2010.<\/p>\n\n\n\n<p>A. Zare, O. Bchir, H. Frigui, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/06\/zare2010comparison\/\">A Comparison of Deterministic and Probabilistic Approaches to Endmember Representation<\/a>,\u201d in 2nd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2010.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/07\/zare2010investigation\/\">An Investigation of Likelihoods and Priors for Bayesian Endmember Estimation<\/a>,\u201d in Proc. MaxEnt 2010: 30th Int. Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering, 2010, pp. 311-318.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/05\/zare2010l1\/\">L1-endmembers: A Robust Endmember Detection and Spectral Unmixing Algorithm<\/a>,\u201d in Proc. SPIE 7695, Algorithms and Technologies for Multispectral, Hyperspectral, and Ultraspectral Imagery XVI, 2010.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/08\/zare2010pattern\/\">Pattern Recognition Using Functions of Multiple Instances<\/a>,\u201d in 20th Int. Conf. Pattern Recognition (ICPR), 2010, pp. 1092-1095.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/06\/zare2010pce\/\">PCE: Piecewise Convex Endmember Detection<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 48, pp. 2620-2632, June 2010.<\/p>\n\n\n\n<p>A. Zare, M. Silvious, R. Close, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learninge\/2010\/04\/zare2010quantifying\/\">Quantifying the Benefit of Airborne and Ground Sensor Fusion for Target Detection<\/a>,\u201d in Proc. SPIE 7664, Detection and Sensing of Mines, Explosive Objects, and Obscured Targets XV, 2010.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/07\/zare2010robust\/\">Robust Endmember Detection Using L1 Norm Factorization<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Honolulu, HI, 2010, pp. 971-974.<\/p>\n\n\n\n<p>A. Zare, O. Bchir, H. Frigui, and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2010\/06\/zare2010spatially\/\">Spatially-smooth Piece-wise Convex Endmember Detection<\/a>,\u201d in 2nd Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2010.<\/p>\n\n\n\n<p><a name=\"#2009\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2009<\/h2>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2009\/08\/zare2009context\/\">Context-based Endmember Detection for Hyperspectral Imagery<\/a>,\u201d in 1st IEEE Workshop on Hyperspectral Image and Signal Processing: Evolution in Remote Sensing (WHISPERS), 2009.<\/p>\n\n\n\n<p><a name=\"#2008\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2008<\/h2>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2008\/12\/zare2008endmember\/\">Endmember Detection Using the Dirichlet Process<\/a>,\u201d in 19th Int. Conf. Pattern Recognition (ICPR), 2008.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2008\/04\/zare2008hyperspectral\/\">Hyperspectral Band Selection and Endmember Detection Using Sparsity Promoting Priors<\/a>,\u201d <em>IEEE Geosci. Remote Sens. Lett.<\/em>, vol. 5, pp. 256-260, Apr. 2008.<\/p>\n\n\n\n<p>A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2008\/12\/zare2008hyperspectraldissertation\/\">Hyperspectral endmember detection and band selection using bayesian methods<\/a>,\u201d PhD Thesis, Gainesville, FL, 2008.<\/p>\n\n\n\n<p>A. Zare, J. Bolton, P. Gader, and M. Schatten, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2008\/01\/zare2008vegetation\/\">Vegetation Mapping for Landmine Detection Using Long-wave Hyperspectral Imagery<\/a>,\u201d <em>IEEE Trans. Geosci. Remote Sens.<\/em>, vol. 46, pp. 172-178, Jan. 2008.<\/p>\n\n\n\n<p><a name=\"#2007\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2007<\/h2>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2007\/07\/zare2007sparsity\/\">Sparsity Promoting Iterated Constrained Endmember Detection with Integrated Band Selection<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Barcelona, 2007, pp. 4045-4048.<\/p>\n\n\n\n<p>A. Zare and P. Gader, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2007\/07\/zare2007sparsitypromoting\/\">Sparsity Promoting Iterated Constrained Endmember Detection in Hyperspectral Imagery<\/a>,\u201d <em>IEEE Geosci. Remote Sens. Lett.<\/em>, vol. 4, pp. 446-450, July 2007.<\/p>\n\n\n\n<p>A. Zare and P. Gader, &#8220;<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2007\/04\/zare2007spice\/\">SPICE: A Sparsity Promoting Iterated Constrained Endmember Extraction Algorithm with Applications to Landmine Detection from Hyperspectral Imagery<\/a>,\u201d in Proc. SPIE 6553, Detection and Remediation Technologies for Mines and Minelike Targets XII, 2007.<\/p>\n\n\n\n<p><a name=\"#2006\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2006<\/h2>\n\n\n\n<p>M. Schatten, P. Gader, J. Bolton, A. Zare, and A. Mendez-Vasquez, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2006\/04\/sensor-fusion-for-airborne-landmine-detection\/\">Sensor Fusion for Airborne Landmine Detection<\/a>,\u201d in Proc. SPIE 6217, Detection and Remediation Technologies for Mines and Minelike Targets XI, 2006.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2004<\/h2>\n\n\n\n<p><a name=\"#2004\"><\/a> P. Gader, A. Mendez-Vasquez, K. Chamberlin, J. Bolton, and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2004\/09\/gader2004multi\/\">Multi-sensor and Algorithm Fusion with the Choquet Integral: Applications to Landmine Detection<\/a>,\u201d in <em>IEEE Int. Geosci. and Remote Sensing Symp. (IGARSS)<\/em>, Anchorage, AK, 2004, pp. 1605-1608 vol.3.<\/p>\n\n\n\n<p><a name=\"#PP\"><\/a><\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Preprint<\/h2>\n\n\n\n<p>A. Seethepalli, L. York, H. Almtarfi, F. Fritschi and A. Zare, \u201c<a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2018\/05\/mpip\/\">A Novel Multi-perspective Imaging Platform (M-PIP) for Phenotyping Soybean Root Crowns in the Field Increases Throughput and Separation Ability of Genotype Root Properties<\/a>,\u201d in <span class=\"highwire-cite-metadata-journal highwire-cite-metadata\"><em>bioRxiv,<\/em>&nbsp;<\/span><span class=\"highwire-cite-metadata-pages highwire-cite-metadata\">309161<\/span><span class=\"highwire-cite-metadata-doi highwire-cite-metadata\">.<\/span>&nbsp;<\/p>\n\n\n\n<p>R. Fick, P. Gader and A. Zare, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2021\/10\/robust-semi-supervised-classification-using-gans-with-self-organizing-maps\/\">\u201cRobust Semi-Supervised Classification using GANs with Self-Organizing Maps\u201d<\/a><\/p>\n\n\n\n<p>A. Hampton, D. Stewart, A. Zare, and J. Keller, <a href=\"https:\/\/faculty.eng.ufl.edu\/machine-learning\/2026\/04\/03\/comparison-of-unsupervised-quantitative-metrics-for-superpixel-segmentation\/\">\u201cComparison of unsupervised quantitative metrics for superpixel segmentation,\u201d<\/a> <em>Available at SSRN 4744767<\/em>.<\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Under Review | 2026 | 2025 | 2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2004 | Preprint Under Review \/ In Preparation A. Hampton, [&hellip;]<\/p>\n","protected":false},"author":468,"featured_media":0,"parent":0,"menu_order":4,"comment_status":"closed","ping_status":"closed","template":"page-templates\/page-sidebar-none.php","meta":{"_acf_changed":false,"inline_featured_image":false,"featured_post":"","footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-11","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/pages\/11","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/users\/468"}],"replies":[{"embeddable":true,"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/comments?post=11"}],"version-history":[{"count":20,"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/pages\/11\/revisions"}],"predecessor-version":[{"id":16345,"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/pages\/11\/revisions\/16345"}],"wp:attachment":[{"href":"https:\/\/faculty.eng.ufl.edu\/machine-learning\/wp-json\/wp\/v2\/media?parent=11"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}